Expected distortions

Michael Behe recently had a paper published in The Quarterly Review of Biology, a non-creationist journal. Here is Jerry Coyne’s conclusion:

Behe has provided a useful survey of mutations that cause adaptation in short-term lab experiments on microbes (note that at least one of these—Rich Lenski’s study— extends over several decades). But his conclusions may be misleading when you extend them to bacterial or viral evolution in nature, and are certainly misleading if you extend them to eukaryotes (organisms with complex cells), for several reasons:

Go to Professor Coyne’s site for the whole review.

It’s all fair enough and no one is really up in arms about Behe’s paper itself. But isn’t it interesting how quickly the creationist intelligent design crowd started distorting the facts?

Over at the intelligent-design site Uncommon Descent, the ever befuddled Denyse O’Leary has already glommed onto the review I wrote yesterday of Michael Behe’s new paper. And, exactly as I predicted, she distorts Behe’s conclusions:

So, not only must the long, slow process of Darwinian evolution create every exotic form of life in the blink of a geological eye, but it must do so by losing or modifying what a life form already has.

In other words, she’s extended Behe’s conclusions, based on viral and bacterial evolution in the lab, to evolution of “every exotic form of life” on the planet. This is exactly what one cannot do with Behe’s conclusions.

It really isn’t a surprise that this happened; Creationists are always distorting scientific papers – and specifically so they can prop up their religious beliefs. I’m just impressed with the utter accuracy of Professor Coyne’s prediction.

This distortion is hardly news, of course—I’m completely confident that Behe not only expected it, but approves of it—but I feel compelled to highlight it once again. Luskin’s three distortions, which correspond to the three caveats attached to Behe’s results:

1. Luskin doesn’t mention that Behe’s analysis concentrated only on short-term laboratory studies of adaptation in bacteria and viruses.

2. Luskin also doesn’t mention that these experiments deliberately excluded an important way that bacteria and viruses gain new genetic elements in nature: through horizontal uptake of DNA from other organisms. This kind of uptake was prohibited by the design of the experiments.

3. Luskin implies that Behe’s conclusions extend to all species, including eukaryotes, even though we know that members of this group (and even some bacteria) can gain new genetic elements and information via gene duplication and divergence. And we know that this has happened repeatedly and pervasively in the course of evolution.

About an hour ago I finished up my last assignment for this semester, and man, it’s always a relief when that special moment arrives. But after reading this creationist intelligent design proponent garbage, I’m already getting antsy to go back and continue with my legitimate education.

Moritz finally gets his Wiki page

I just don’t think it’s the one he wanted.

(A certain someone else has a page, too.)

Common sense and the individual mandate

Over at The Pump Handle, Liz Borkowski lays out the obvious reasons why we need the individual mandate.

To understand the role of the individual mandate, we need to remember that insurance is fundamentally about pooling risk. Out of a large pool of people, the odds are that only a few of them will incur major medical expenses in a given year. Everyone in the pool pays an annual premium, and those premiums will cover the expenses of the unlucky ones who end up needing chemo or heart surgery.

What the government has done with the Affordable Care Act is to promise the insurance industry a large risk pool that includes a lot of healthy youngsters who’d previously gone uninsured, and in exchange require insurance companies to stop denying, rescinding, and charging exorbitant rates for coverage based on applicants’ health conditions. To create the larger risk pool, the law requires that everyone have health insurance, and it provides Medicaid coverage and subsidies for those who’d have trouble affording private plans on their own.

If we lose the individual mandate, insurance companies will be left with a smaller, sicker risk pool, and the result will be higher premiums. Jonathan Gruber does the math and finds that without the mandate, average premiums would be 27% higher in 2019.

I think the initial conservative response is going to be an appeal to libertarian ideals. In fact, that has been the only Republican response since the country started discussing the issue. But trying to argue ideology isn’t going to fix anything. Obama – a pragmatist more than a so-called socialist or anything else people call him without being able to define – and the Democrats pushed through a bill which helps to resolve the issue: high health care costs and insurance companies (legally) operating in bad faith. The only way we’re going to make this thing work is if we all pay into it. That might suck, and we might whine that the single mother or father should – from an ideological/asshole standpoint – be shit-out-luck when she or he breaks a leg, but it’s just about the only thing that’s going to work in the U.S.

A valid question

Even real doctors can indulge in quackery

My local paper recently ran a piece about a doctor, Dustin Sulak, whose practice has exploded since Maine expanding its medical marijuana laws. While the man is a legitimate doctor – and while I support his efforts to responsibly prescribe marijuana to those who need it – I found a couple of parts of the article tremendously disappointing.

On the wall of Sulak’s examination room, next to his diplomas and state license, are framed certificates naming him a Reiki master and a clinical hypnotherapist.

An advocate for alternative medicine, Sulak gives his patients advice about healthier lifestyle choices, and many of them leave his office with bottles of supplements sold at the reception desk.

There is no evidence for the efficacy of Reiki and it rests on no scientific grounds in any regard. In fact, a major basis for it is the existence of Chakras. And guess what? They’re made up.

As far as hypnotherapy is concerned, I’m told by a psychology graduate student (who has recently received his master’s degree and is on his way to becoming a doctor) that in order for hypnosis to be practiced with any worth, it is generally necessary that the practitioner be a psychologist. I do not believe Dr. Sulak has those credentials, but I am not certain. At any rate, Dr. Sulak may be effective in his use of this practice. (See clarification here.)

Where the article says he is an advocate for alternative medicine and he recommends healthy lifestyle choices, it makes me rather queasy to see the paper trying to associate the two notions. First, if alternative medicine was medicine, we would just call it medicine. Second, any doctor will recommend healthy lifestyle choices. But it is unclear what that means in this context.

I’m also not a fan whatsoever of his anti-sunscreen position. Sunscreen ought to be used whenever long exposure to the sun is likely. That prevents cancer. End of story.

Also, he says this about cell phones:

I recommend using speaker phone, or a headset that has a plastic tube or a ferrite bead to prevent transmission of radiation into the ear. Please keep your cell phones away from children’s heads and pregnant mothers’ bellies!

For one of my cancer classes I recall the professor asking us to look into the evidence for a cell phone-cancer link and to let him know what we thought, how we felt about potential bans, etc. I had to say, the evidence was exceedingly weak. We have been using cell phones for a couple decades (we all remember Saved by the Bell), and we’ve been using them heavily for the past decade. Well over 4 billion people are on them daily. We have a load of studies. We have give ample opportunity for cancer to rear its tenacious head; no causative link exists. Let’s be done with this unwarranted fascination until there is some positive evidence to examine. Please.

Dr. Sulak also seems skeptical of vaccines, but he is far from explicit, only posting a few videos critical of the reaction to H1N1. The government’s response was generally appropriate (though we did end up throwing away a lot expired vaccines) and I hope to see something similar if we find ourselves on the brink of another potential – and preventable – epidemic. Besides, the anti-vax crowd has already caused enough deaths.

In summary, I’m rather skeptical of parts of Dr. Sulak’s practice, but virtually none of it could be called quackery. Unfortunately, the key word in that sentence is “virtually”. His use of Reiki is out-and-out, pure quackery. The ‘field’ rests on notions of palm healing, the proposition of fictional Chakras, and it has no physical basis. Reiki is not science and it has no place in real medicine.

Hiking quiz

Can anyone tell me where this is?

Update: I guess I forgot I have the Internet. It’s Caminito del Rey. Take a look.

Thought of the day

If anyone was serious about cutting the budget, we would be slashing the funding we give our 20th century-style military.

Follow-up: Praying a child to death

I wrote last year of a Pennsylvania couple who prayed their child to death. The 2 year old toddler, Kent Schaible, would have survived if his parents weren’t nut jobs motivated by their religion. We can’t bring Kent back, but the more we convict monsters of praying their kids to death, maybe the fewer kids we see needlessly die.

A fundamentalist Christian couple who relied on prayer, not medicine, to cure their dying toddler son was convicted Friday of involuntary manslaughter and child endangerment. Herbert and Catherine Schaible of Philadelphia face more than a decade in prison for the January 2009 pneumonia death of 2-year-old Kent.

“We were careful to make sure we didn’t have their religion on trial but were holding them responsible for their conduct,” jury foreman Vince Bertolini, 49, told The Associated Press. “At the least, they were guilty of gross negligence, and (therefore) of involuntary manslaughter.”

The Schaibles, who have six other children, declined to comment as they left the courthouse to await sentencing Feb. 2.

This is great news, but I have very little faith in the system to dole out an appropriate sentence. As we’ve seen in the past, some parents get a slap on the wrist for praying their child to death. I hope to see something more substantial for the Schaibles. After all, the point of the system ought to be to correct the behavior of individuals for the better (as the article said, the Schaibles have 6 other children; any that are very young may be in danger) and to make sure society is safer. If parents think they can get away with praying for their sick children instead of seeking real medical help – 30 states have protections for faith healing – then we’re going to keep seeing awful stories like this because children of religious nut jobs will not be safe.

The irrationally harsh laws of America

One thing I can’t help but notice whenever MSNBC’s Lockup comes on is that the U.S. has a lot of morally horrific laws. Plenty of inmates are absolutely nuts and need to be in prison for a long time, but there are also so many who don’t deserve the sentences they get. The U.S. is doing itself a disservice by locking up people for insanely long times, especially when the crimes are non-violent or even victimless. Of course, if our citizens were as white as our institutions, we probably wouldn’t be trying to show the world we can be less forgiving than China.

And the reprehensible laws don’t end there. We have people who get in trouble because some overzealous, moron prosecutors internalize rules. Take the case from last year where teens who were of the age of consent sent nude pictures of themselves to each other over their phones. They got community service for distributing child pornography. That helps no one. No one.

And of course then there’s that whole “Murder is wrong…unless governments do it!” law. I mean, the death penalty. It’s the height of hypocrisy, devalues human life, and is virtually only supported by nations with backwards laws – and I most certainly include the U.S. in that grouping.

With all these irrational laws and punishments, I find it so refreshing when I hear about organizations that fight to help convicts. The most visible groups are the ones that try to stop state-sanctioned murder, but there are also ones like Stanford’s Three Strikes Project that fight against those awful three strike laws present in 26 states.

Students at Stanford Law School’s novel Three Strikes Project, which has successfully overturned 14 life prison terms handed down for non-violent crimes under California’s unforgiving sentencing law, are joined by an unusual coalition in their latest bid. The county judge and prosecutor who sent Shane Taylor behind bars for 25-years-to-life in 1996 now want to help set him free.

His public defender at trial is also supporting Taylor’s plea for a reduced sentence by conceding he failed to mount an adequate defense.

Taylor’s offenses: two burglary convictions when he was 19, and a third conviction for possessing about $10 worth of methamphetamine.

Any reasonable person can see that it makes no sense to send a 19 year old to prison until he’s 44 because he did three stupid things. And this is the typical of these sort of laws. We routinely send young people to prison, removing virtually all discretion from the hands of judges, and to what end? We aren’t educating them. We aren’t removing them from negative environments. All we’re doing is placing them with criminals who are going to teach them how to make a living being criminals.

But maybe Taylor’s crimes do deserve a lot of prison time, regardless of the law, right?

The judge, Howard Broadman, became haunted by memories of the case, believing he had rendered a bad decision in invoking the harsh law. He regretted that in calculating the prison sentence he hadn’t ignored one or both of Taylor’s previous felony convictions: Attempted burglary and burglary that netted a homeless and methamphetamine-addicted Taylor a pizza paid for with a forged check.

And some of the other people in prison under this horrible law?

The California Department of Corrections and Rehabilitation says 8,570 third strikers were in prison as of December 2009. Slightly less than half were sentenced for “crimes against property,” drugs and other offenses, including 55 drunken driving convictions.

No one wants to go easy on drunk drivers, but 25 years? Come on.

There’s no rationality behind these sort of laws. They are motivated by nothing more than emotional and a desire for revenge. And they need to go.

Still want more institutional racism?

I could just cite the statistics of every federal prison. Or I could point to the massive disparity between white and black unemployment. Or the just as dismaying disparity between black and white income. Or I could find all the studies that show employers are significantly less likely to call back applicants with names like “Tyrone” and “Latisha” than they are to call back applications with names like “Adam” or “Steve”, despite the applications being virtually the same. Or I could point to the minimum sentencing periods for drug convictions that, until Obama recently rectified the Reagan-inspired problem, hurt black communities far more than white communities. But instead I’ll use the more convenient example of Tulia, Texas, a place about which everyone needs to know.